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Report2003_06.pdf

report2003_06.pdf
Preview of report2003_06.pdf
🔗 Source: pub.uni-bielefeld.de
📊 Size: 270 KB
👤 Author: Klaus-Bernd Schürmann, Jens Stoye
⬇️ Downloads: 112

Summary

Klaus-Bernd Schürmann and Jens Stoye present a construction algorithm for suffix trees, which is the fastest practical method for large suffix trees, and a clustered storage scheme for fast access when main memory is limited. The algorithm is designed for genomic sequence analysis, where the amount of data is growing exponentially, and suffix trees are widely used in large-scale applications like data mining and information retrieval. The construction and storage of suffix trees take O(|t|) time and space, allowing efficient access to all substrings of a text t. The authors propose a persistent storage mechanism for fast query processing, which is essential for applications where the considered string changes rarely. Experimental results show that the query time is faster than other recent index structures like the enhanced suffix array.

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Klaus-Bernd Schürmann and Jens Stoye present a construction algorithm for suffix trees, which is the fastest practical method for large suffix trees, and a...

Technical Information

  • File Format: PDF
  • File Size: 270 KB
  • Pages: 31
  • Language: EN
  • Author: Klaus-Bernd Schürmann, Jens Stoye
  • Total Downloads: 112
  • Last Updated: 3 hours ago

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