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Teaching:2018winter: Cg:dcjindel_braga_wi Lling.pdf

dcjindel_braga_willing.pdf
Preview of teaching:2018winter: cg:dcjindel_braga_wi lling.pdf
🔗 Source: gi.cebitec.uni-bielefeld.de
📊 Size: 437 KB
👤 Author: Marília D.V. Braga, Eyla Willing, and Jens Stoye
⬇️ Downloads: 143

Summary

A linear time algorithm to compute the distance between two multi-chromosomal genomes with unequal content, but without duplicated markers, considering insertions, deletions, and double cut and join (DCJ) operations. The approach derives algorithms to sort one genome into another using DCJ operations, insertions, and deletions, and compares two types of sorting scenarios. The method is applied to analyze six species of Rickettsia, identifying preliminary evidence of clusters of deletions, and a surcharge is proposed to establish the triangle inequality.

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A linear time algorithm to compute the distance between two multi-chromosomal genomes with unequal content, but without duplicated markers, considering...

Technical Information

  • File Format: PDF
  • File Size: 437 KB
  • Pages: 18
  • Language: EN
  • Author: Marília D.V. Braga, Eyla Willing, and Jens Stoye
  • Total Downloads: 143
  • Last Updated: 1 week ago

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